epiconcept-paris.r-universe.dev

[epiconcept-paris] ervissexplore 0.1.0

y.mansiaux@epiconcept.fr (Yohann Mansiaux) — Wed, 11 Mar 2026 13:53:17 GMT

Provides easy access to ERVISS (European Respiratory Virus Surveillance Summary) data from the EU-ECDC . Enables retrieval, filtering, and optional visualization of data across European countries. Data is fetched directly from the EU-ECDC Respiratory Viruses Weekly Data repository, with support for both latest data and historical snapshots for reproducible analyses.

[epiconcept-paris] vaccinationimpact 0.1.0

y.mansiaux@epiconcept.fr (Yohann Mansiaux) — Mon, 09 Mar 2026 07:33:36 GMT

Tools to estimate the impact of vaccination campaigns at population level (number of events averted, number of avertable events, number needed to vaccinate). Inspired by the methodology proposed by Foppa et al. (2015) and Machado et al. (2019) for influenza vaccination impact.

[epiconcept-paris] EpiReport 1.0.4

l.merdrignac@epiconcept.fr (Lore Merdrignac) — Fri, 02 May 2025 08:42:22 GMT

Drafting an epidemiological report in 'Microsoft Word' format for a given disease, similar to the Annual Epidemiological Reports published by the European Centre for Disease Prevention and Control. Through standalone functions, it is specifically designed to generate each disease specific output presented in these reports and includes: - Table with the distribution of cases by Member State over the last five years; - Seasonality plot with the distribution of cases at the European Union / European Economic Area level, by month, over the past five years; - Trend plot with the trend and number of cases at the European Union / European Economic Area level, by month, over the past five years; - Age and gender bar graph with the distribution of cases at the European Union / European Economic Area level. Two types of datasets can be used: - The default dataset of dengue 2015-2019 data; - Any dataset specified as described in the vignette.